The detailed information of tRNA gene sequence


Sequence ID>WENV11101316
Genome IDAGBE01001052
Search identical group
Phylum/ClassMarine metagenome, Gulf of Maine surface waters
Species
Start position on genome 1601
End posion on genome 1516
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aacatttttT
tRNA gene sequence 
GCCGAGGTCGCTTAGTTCGGTAGAGCGCGGGCCTTGAGAGCCTGTGTGCGCAAGCACGCG
GGGGTTCAAATCCCTCTCTCGGCGTtt
Downstream region at tRNA end position 
ttatttttct
Secondary structure (Cloverleaf model)
>WENV11101316	Ser	TGA
                   T      GTtt ttatttttct
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        C      | + | | |     A
    T       T T C G       G G G G G     C
    C       + | | |                 T T
    G       G A G C
      G T A        G     TGTGCGCAAGCACGC
                    C - G
                    G + T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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