The detailed information of tRNA gene sequence


Sequence ID>C11200027
Genome IDCP002622
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesStutzerimonas stutzeri DSM 4166 [CP002622]
Start position on genome 246839
End posion on genome 246744
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
gaccagataa
tRNA gene sequence 
GGAAGGCAATCGCACCCGGTGGTGCGGCCGGGCTTCAAACCCGGTTGGGGGCGGCAGCCG
CTCCCGGGTGAGTTCGACTCTCACTGCCTTCCGCCA
Downstream region at tRNA end position 
atctccctcg
Secondary structure (Cloverleaf model)
>C11200027	SeC	TCA
                   a      GCCA atctccctcg
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T          T C
                    A     C A C T C     A
      C C C        T      | | | | |     G
    G       A C G C       G T G A G     C
    G       | | | |                 T T
    T       T G C G
      G G          G     TTGGGGGCGGCAGCCGCTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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