The detailed information of tRNA gene sequence


Sequence ID>WENV11101530
Genome IDAGFS01052180
Search identical group
Phylum/Class[AGFS] ant fungus garden metagenome; Atta colombica fungus garden top
Species
Start position on genome 59632
End posion on genome 59721
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgattatat
tRNA gene sequence 
AGAGAGTTGGATGAGAGGCTTAAGTCGCTTCCCTGCTAAGGAAGTGTGGGATTAGTTCCA
CCGAGGGTTCGAATCCCTCACTCTCTGCCA
Downstream region at tRNA end position 
cattaacgat
Secondary structure (Cloverleaf model)
>WENV11101530	Ser	GCT
                   t      GCCA cattaacgat
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G T A G       G A G G G     C
    G         + | |                 T T
    C       A G T C
      T T A        G     TGTGGGATTAGTTCCACC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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