The detailed information of tRNA gene sequence


Sequence ID>WENV11101599
Genome IDAGFS01075288
Search identical group
Phylum/Class[AGFS] ant fungus garden metagenome; Atta colombica fungus garden top
Species
Start position on genome 9549
End posion on genome 9643
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atcgaggcgc
tRNA gene sequence 
GGAAGATCGTCATCTCCGGTGAGGTGGCTGGACTTCAAATCCAGTTGGGGCCGCCAGCGG
TCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aaatctctct
Secondary structure (Cloverleaf model)
>WENV11101599	SeC(p)	TCA
                   c      GCCA aaatctctct
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T A C       G C A G G     C
    G       | + | |                 T T
    T       G G T G
      G A          G     TTGGGGCCGCCAGCGGTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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