The detailed information of tRNA gene sequence


Sequence ID>WENV11101688
Genome IDAGFS01106458
Search identical group
Phylum/Class[AGFS] ant fungus garden metagenome; Atta colombica fungus garden top
Species
Start position on genome 28613
End posion on genome 28539
Amino Acid Pseudo
Anticodon TTC
Upstream region at tRNA start position 
ccgtaccact
tRNA gene sequence 
ACTCTATTCGTCTATCGGTTAGGACGTTGTCCTTTCACGCCAGAAAGAACAGTTCGATTC
TGTTATAGAGTACTA
Downstream region at tRNA end position 
caatgtgaaa
Secondary structure (Cloverleaf model)
>WENV11101688	Pseudo	TTC
                   t      ACTA caatgtgaaa
                     A - T
                     C - G
                     T - A
                     C - G
                     T - A
                     A - T
                     T - A          T T
                    T     T T G T C     A
      C T A        C      | | | | |     G
    G       T C T G       A A C A G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAG
                    T + G
                    T - A
                    G - C
                    T   C
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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