The detailed information of tRNA gene sequence


Sequence ID>WENV11101953
Genome IDAGFT01022384
Search identical group
Phylum/Class[AGFT] ant fungus garden metagenome; Atta colombica fungus garden bottom
Species
Start position on genome 1695
End posion on genome 1789
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position
atgcaggcgc
tRNA gene sequence
GGAAGATCGTCATCTCCGGTGAGGTGGCTGGACTTCAAATCCAGTTGGGGACGCCAGCGT
TCCCGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position
aaaattcatt
Secondary structure (Cloverleaf model)
>WENV11101953	SeC(p)	TCA
                   c      GCCA aaaattcatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    G     T G T C C     A
      C C T        T      + | | | |     G
    G       C T A C       G C A G G     C
    G       | + | |                 T T
    T       G G T G
      G A          G     TTGGGGACGCCAGCGTTCCCGG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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