The detailed information of tRNA gene sequence


Sequence ID>WENV11102229
Genome IDAGFT01131876
Search identical group
Phylum/Class[AGFT] ant fungus garden metagenome; Atta colombica fungus garden bottom
Species
Start position on genome 3088
End posion on genome 3180
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgtgttgtgt
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGCGGTCAAAAGCT
GCATCCGGGGTTCGAATCCCCGCCTCACCGCCA
Downstream region at tRNA end position 
ttttgcatcc
Secondary structure (Cloverleaf model)
>WENV11102229	Ser	GCT
                   t      GCCA ttttgcatcc
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G C C C C     A
      A G A        G      | | | | |     G
    G       G C C G       C G G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGCGGTCAAAAGCTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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