The detailed information of tRNA gene sequence


Sequence ID>W1510651371
Genome IDCVSH01000052
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter ubique ubique SCGC AAA795-E22 [CVSH]
Start position on genome 155901
End posion on genome 155825
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aatctaatac
tRNA gene sequence 
CGCGGGGTGGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGGCGGTTCAAA
TCCGTCCCCCGCAACCA
Downstream region at tRNA end position 
atttaaattt
Secondary structure (Cloverleaf model)
>W1510651371	Met	CAT
                   c      ACCA atttaaattt
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G C C     A
      T G A        G      | + | | |     A
    C       C G A G       G G C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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