The detailed information of tRNA gene sequence


Sequence ID>C11111344
Genome IDCP002221
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenobacter thermophilus TK-6 [CP002221]
Start position on genome 1162466
End posion on genome 1162390
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tgagaagtta
tRNA gene sequence 
GCCCCCATCGTCTAGCCCGGTCCAGGACACCGCCCTTTCAAGGCGGAGATCGCGGGTTCG
AATCCCGCTGGGGGTGCtt
Downstream region at tRNA end position 
ctcccaattg
Secondary structure (Cloverleaf model)
>C11111344	Glu	TTC
                   a      GCtt ctcccaattg
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C G C C C     A
    C C G A        C      | | | | |     G
  C         T C T G       G C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C C A        A     AGATC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.-

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