The detailed information of tRNA gene sequence


Sequence ID>C11111361
Genome IDCP002221
Search identical group
Phylum/ClassAquificota
SpeciesHydrogenobacter thermophilus TK-6 [CP002221]
Start position on genome 201790
End posion on genome 201700
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atccttatta
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCTAAGGCGCAGCACTGGAAATGCTGTGTACGGTTAATCGCC
GTACCGCGGGTTCGAATCCCGCCCTCTCCGCat
Downstream region at tRNA end position 
caatcagttt
Secondary structure (Cloverleaf model)
>C11111361	Ser	GGA
                   a      GCat caatcagttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T T
    T       A G G C
      C T A        G     TGTACGGTTAATCGCCGTACC
                    C - G
                    A - T
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.-

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