The detailed information of tRNA gene sequence


Sequence ID>C11111485
Genome IDCP002353
Search identical group
Phylum/ClassPlanctomycetota
SpeciesIsosphaera pallida ATCC 43644 [CP002353]
Start position on genome 3078200
End posion on genome 3078106
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttgcgacccc
tRNA gene sequence 
GGGAGTGTTTTCCGGCTGGTGCCGGGCGCGGTCTTCAAAACCGTCGGGCGGCGTGGCGAC
ACGTCGCCGGTGGGTTCGATTCCCATCCGCTCCCGttg
Downstream region at tRNA end position 
attgcgtcga
Secondary structure (Cloverleaf model)
>C11111485	SeC	TCA
                   c      Gttg attgcgtcga
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     T   C          T T
                    T     T A C C C     A
      T C G        T      + | | | |     G
    G       G C C T       G T G G G     C
    G       | | | +                 T T
    T       C G G G
      G C          C     CGGGCGGCGTGGCGACACGTCGCCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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