The detailed information of tRNA gene sequence


Sequence ID>C11111496
Genome IDCP002353
Search identical group
Phylum/ClassPlanctomycetota
SpeciesIsosphaera pallida ATCC 43644 [CP002353]
Start position on genome 727894
End posion on genome 727806
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgactttccC
tRNA gene sequence 
GGAGGGGTGCCAGAGTGGTCGATTGGGACGGTCTTGAAAACCGTTGAACCCGCAAGGGTT
CCGTGGGTTCGAATCCCACCCCCTCCGTtg
Downstream region at tRNA end position 
ccgtaccgtt
Secondary structure (Cloverleaf model)
>C11111496	Ser	TGA
                   C      GTtg ccgtaccgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G T G G G     C
    G       + | | |                 T T
    T       T T G G
      C G A        G     TGAACCCGCAAGGGTTCC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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