The detailed information of tRNA gene sequence


Sequence ID>C11116314
Genome IDCP002361
Search identical group
Phylum/ClassDeinococcota
SpeciesOceanithermus profundus DSM 14977 [CP002361]
Start position on genome 1428177
End posion on genome 1428253
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgtggggcag
tRNA gene sequence 
GGCCCCGTGGTGTAGTCGGTTAACACACCCGCCTGTCACGTGGGAGATCGCGGGTTCGAG
TCCCGTCGGGGCCGCCA
Downstream region at tRNA end position 
gaccgccgcc
Secondary structure (Cloverleaf model)
>C11116314	Asp	GTC
                   g      GCCA gaccgccgcc
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        G      + | | | |     G
    C       T G T G       G C G G G     C
    G       | | | |                 T T
    G       A C A C
      T T A        A     AGATC
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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