The detailed information of tRNA gene sequence


Sequence ID>C11117128
Genome IDCP002511
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesCandidatus Pelagibacter sp. IMCC9063 [CP002511]
Start position on genome 960787
End posion on genome 960714
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gaataaatat
tRNA gene sequence 
GGCCACGTGGCGGAATGGTTACGCAGAGGATTGCAAATCCTTTTATTCCAGTTCGATTCT
GGACGTGGCCTCCA
Downstream region at tRNA end position 
tatttatatt
Secondary structure (Cloverleaf model)
>C11117128	Cys	GCA
                   t      TCCA tatttatatt
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     C - G
                     G - C          T T
                    T     A G G T C     A
        A A        G      | | | | |     G
      T     G G C G       T C C A G     C
      G       | | |                 T T
      G     A C G C
        T T        A     TTAT
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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