The detailed information of tRNA gene sequence


Sequence ID>C11122325
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 1052262
End posion on genome 1052339
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ggcgcaggaa
tRNA gene sequence 
CGGGGCGTGGCGCAGCCTGGTCAGCGCGCTTGGTTCGGGACCAAGAGGTCGGGGGTTCAA
ATCCCCCCGCCCCGACCA
Downstream region at tRNA end position 
cccacctcag
Secondary structure (Cloverleaf model)
>C11122325	Pro	CGG
                   a      ACCA cccacctcag
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C C C C C     A
    C C G A        G      | | | | |     A
  T         C G C G       G G G G G     C
  G         | | | |                 T T
  G         G C G C
    T C A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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