The detailed information of tRNA gene sequence


Sequence ID>C11122341
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 1596864
End posion on genome 1596789
Amino Acid His
Anticodon GTG
Upstream region at tRNA start position 
tattattgtg
tRNA gene sequence 
GTGGGAGTAGCTCAGTTGGTGGAGCGCCGGGTTGTGGCCCCGGCGGTCGCGGGTTCAAGT
CCCGTCTCCCACCCCA
Downstream region at tRNA end position 
tagaaatccg
Secondary structure (Cloverleaf model)
>C11122341	His	GTG
                   g      CCCA tagaaatccg
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T G          G     CGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  T       C
                  T       G
                    G T G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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