The detailed information of tRNA gene sequence


Sequence ID>C11122344
Genome IDCP002444
Search identical group
Phylum/ClassAquificota
SpeciesThermovibrio ammonificans HB-1 [CP002444]
Start position on genome 1596600
End posion on genome 1596526
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gctccactaa
tRNA gene sequence 
GGCGGCGTAGCCAAGTGGTAAGGCAGGGGACTGCAAATCCCTTATTCGGCGGTTCGATTC
CGCCCGCCGCCTCCA
Downstream region at tRNA end position 
cttaaacctt
Secondary structure (Cloverleaf model)
>C11122344	Cys	GCA
                   a      TCCA cttaaacctt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     C C G C C     A
        G A        A      | | | | |     G
      T     A C C G       G G C G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     TATTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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