The detailed information of tRNA gene sequence


Sequence ID>C11122672
Genome IDCP002829
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesThermodesulfobacterium geofontis OPF15 [CP002829]
Start position on genome 475697
End posion on genome 475607
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtttttaaaa
tRNA gene sequence 
GGAGGAGTGCCCGAGTGGACGAAGGGGGCCGACTCGAAATCGGCTAAGGGAGCAAATCTC
CCTTCGGGGGTTCGAATCCCTCCTCCTCCGCat
Downstream region at tRNA end position 
aaaaattttt
Secondary structure (Cloverleaf model)
>C11122672	Ser	CGA
                   a      GCat aaaaattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G C C C       G G G G G     C
    G         | | |                 T T
    A       A G G G
      C G A        G     TAAGGGAGCAAATCTCCCTTC
                    G - C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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