The detailed information of tRNA gene sequence


Sequence ID>W11121732
Genome IDADOJ01000037
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesActinobacillus pleuropneumoniae serovar 10 str. D13039 [ADOJ]
Start position on genome 71430
End posion on genome 71519
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgttttcaac
tRNA gene sequence 
GGAGGAATGGTCGAGTGGTTGAAGGCACCGGTCTTGAAAACCGGCGAGGGTTTACGCCCT
CCGTGAGTTCGAATCTCACTTCCTCCGCCA
Downstream region at tRNA end position 
tctaattata
Secondary structure (Cloverleaf model)
>W11121732	Ser	TGA
                   c      GCCA tctaattata
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G A G     C
    G         | + |                 T T
    T       A G G C
      T G A        A     CGAGGGTTTACGCCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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