The detailed information of tRNA gene sequence


Sequence ID>C11123200
Genome IDCP002777
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus thermophilus SG0.5JP17-16 [CP002777]
Start position on genome 1192609
End posion on genome 1192523
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ccttgcgtct
tRNA gene sequence 
GCCGGGGTGGCGGAATTGGTAGACGCGCATGATTCAGGGTCATGTGCCCGCAAGGGCGTG
CGGGTTCAAGTCCCGCCCCCGGCACCA
Downstream region at tRNA end position 
gaaggccccc
Secondary structure (Cloverleaf model)
>C11123200	Leu	CAG
                   t      ACCA gaaggccccc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G C G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGCCCGCAAGGGCGT
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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