The detailed information of tRNA gene sequence


Sequence ID>W11135510
Genome IDAEFB01000240
Search identical group
Phylum/ClassAcidithiobacillia
SpeciesAcidithiobacillus sp. GGI-221 [AEFB]
Start position on genome 2355
End posion on genome 2266
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttttagtatt
tRNA gene sequence 
GGAGTGTTGCCAGAGAGGCCTATTGGCGCTGCTTGGAAAGCAGATGGTCGGGAAACCGGC
ACGGGGGTTCAAATCCCTCACGCTCCGCCA
Downstream region at tRNA end position 
aaaacccctg
Secondary structure (Cloverleaf model)
>W11135510	Ser	GGA
                   t      GCCA aaaacccctg
                     G - C
                     G - C
                     A - T
                     G - C
                     T + G
                     G - C
                     T - A          T A
                    T     C T C C C     A
      A G A        G      | + | | |     A
    G       G A C C       G G G G G     C
    G       + | | |                 T T
    C       T T G G
      C T A        C     TGGTCGGGAAACCGGCAC
                    G   A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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