The detailed information of tRNA gene sequence


Sequence ID>W1511581102
Genome IDLARW01000057
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesSphingomonas sp. SRS2 [LARW]
Start position on genome 33565
End posion on genome 33655
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgatagtgc
tRNA gene sequence 
GGAGCGGTGGCCGAGTGGTCGAAGGCGCTCGCCTGGAAAGTGAGTATACGTCAAAAGCGT
ATCGAGGGTTCGAATCCCTCCCGCTCCGCCA
Downstream region at tRNA end position 
ggaccccctc
Secondary structure (Cloverleaf model)
>W1511581102	Ser	GGA
                   c      GCCA ggaccccctc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACGTCAAAAGCGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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