The detailed information of tRNA gene sequence


Sequence ID>W1511601346
Genome IDLBUS01000016
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Peregrinibacteria bacterium GW2011_GWF2_38_29 GW2011_GWF2_38_29 [LBUS]
Start position on genome 28834
End posion on genome 28923
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atctcaaaac
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCCTAGTGCGTTCGCTTGGAAAGCGAATATACCTGAAAGGGTA
TCCAGGGTTCAAATCCCTGCCTCTCCGCCA
Downstream region at tRNA end position 
aatcacttta
Secondary structure (Cloverleaf model)
>W1511601346	Ser	GGA
                   c      GCCA aatcacttta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G T C C C     A
      T G A        C      | | | | |     A
    G       T A C G       C A G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TATACCTGAAAGGGTATC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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