The detailed information of tRNA gene sequence


Sequence ID>W1511602628
Genome IDLBWM01000001
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Peregrinibacteria bacterium GW2011_GWF2_39_17 GW2011_GWF2_39_17 [LBWM]
Start position on genome 19346
End posion on genome 19257
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tactaattac
tRNA gene sequence 
GGAGAGATGGCCGAGCGGTCGATGGCGGCAGTCTTGAAAACTGTTAGGGGCGCAAGCCTC
TCCTGGGTTCGAATCCCAGTCTCTCCGCCA
Downstream region at tRNA end position 
attttcactt
Secondary structure (Cloverleaf model)
>W1511602628	Ser	TGA
                   c      GCCA attttcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G A C C C     A
      C G A        G      | | | | |     G
    G       G C C G       C T G G G     C
    G       + | | |                 T T
    T       T G G C
      C G A        G     TAGGGGCGCAAGCCTCTC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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