The detailed information of tRNA gene sequence


Sequence ID>W1511607297
Genome IDLCCN01000023
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Amesbacteria bacterium GW2011_GWA2_42_12 bacterium GW2011_GWA2_42_12 [LCCN]
Start position on genome 5149
End posion on genome 5062
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgtaacaaa
tRNA gene sequence 
GGAGAGGTCGCATAGTGGTCTAGTGCGATAGTCTTGAAAACTATTAAGAGCGCAAGCTCT
TCGCGAGTTCGACTCTCGCCCTCTCCGCac
Downstream region at tRNA end position 
cagcagatca
Secondary structure (Cloverleaf model)
>W1511607297	Ser	TGA
                   a      GCac cagcagatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    T     C G C T C     A
      T G A        C      | | | | |     G
    G       T A C G       G C G A G     C
    G       + | | |                 T T
    T       G T G C
      C T A        G     TAAGAGCGCAAGCTCTTC
                    A - T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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