The detailed information of tRNA gene sequence


Sequence ID>W1511611531
Genome IDLCHU01000002
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Giovannonibacteria bacterium GW2011_GWA2_44_13b bacterium GW2011_GWA2_44_13b [LCHU]
Start position on genome 54054
End posion on genome 54131
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
cgcagccaat
tRNA gene sequence 
GCTCCTATCGTCTAGCCTGGCCTAGGACACCGGCTTTTCAAGCCGAGAACCCGGGTTCGA
ATCCCGGTGGGAGCACAA
Downstream region at tRNA end position 
tgcgatattg
Secondary structure (Cloverleaf model)
>W1511611531	Glu	TTC
                   t      ACAA tgcgatattg
                     G - C
                     C - G
                     T - A
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     G G C C C     A
    C C G A        C      | | | | |     G
  T         T C T G       C C G G G     C
  G         + | | |                 T T
  G         G G A C
    C C T A        A     GAAC
                    C   A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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