The detailed information of tRNA gene sequence


Sequence ID>W1511612688
Genome IDLCJG01000038
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Collierbacteria bacterium GW2011_GWB1_44_6 bacterium GW2011_GWB1_44_6 [LCJG]
Start position on genome 3650
End posion on genome 3574
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position
attgtaattt
tRNA gene sequence
GTGCTCGTAGCTTAATTGGATAGAGCATTCCCCTCCGAAGGGAAAGGTTGTGAGTTCGAG
TCTCACCGAGCGCACAA
Downstream region at tRNA end position
attttttatt
Secondary structure (Cloverleaf model)
>W1511612688	Arg	CCG
                   t      ACAA attttttatt
                     G - C
                     T + G
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T G
                    T     C A C T C     A
      T A A        A      | | | | |     G
    T       T T C G       G T G A G     C
    G       + | | |                 T T
    G       G A G C
      A T A        A     AGGTT
                    T - A
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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