The detailed information of tRNA gene sequence


Sequence ID>W1511613178
Genome IDLCJZ01000006
Search identical group
Phylum/ClassUnclassified
Speciescandidate division Kazan bacterium GW2011_GWB1_45_10 GW2011_GWB1_45_10 [LCJZ]
Start position on genome 88
End posion on genome 1
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggcgctttgt
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCCTAGTGCACTCGCTTGGAAAGCGGGCATACCGCAAGGTATC
GCGGGTTCAAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>W1511613178	Ser	GGA
                   t      GCCA nnnnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      T G A        C      | | | | |     A
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        A     CATACCGCAAGGTATC
                    C - G
                    T + G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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