The detailed information of tRNA gene sequence


Sequence ID>W1511613228
Genome IDLCKB01000004
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Collierbacteria bacterium GW2011_GWD2_45_10 bacterium GW2011_GWD2_45_10 [LCKB]
Start position on genome 36934
End posion on genome 36861
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
acattaacac
tRNA gene sequence 
AGGTCTGTAGCTCAATGGGTAGAGTAATCGCCTCCAAAGCGAGAGGTTGTAGGTTCGAGT
CCTACCAGGCCTGCtc
Downstream region at tRNA end position 
ccaagtaaag
Secondary structure (Cloverleaf model)
>W1511613228	Trp	CCA
                   c      GCtc ccaagtaaag
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     T - A
                     G - C          T G
                    T     C A T C C     A
      T A A        A      | | | | |     G
    G       C T C G       G T A G G     C
    G       | | | +                 T T
    G       G A G T
      T A          A     AGGTT
                    A   G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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