The detailed information of tRNA gene sequence


Sequence ID>W1511613969
Genome IDLCKX01000012
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Magasanikbacteria bacterium GW2011_GWA2_45_39 bacterium GW2011_GWA2_45_39 [LCKX]
Start position on genome 46803
End posion on genome 46879
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaaatgagag
tRNA gene sequence 
GGGTGTCTAGCTCAGTTGGTTAGAGCGCTGTCCTCACACGACAGAGGTCACAGGTTCGAA
TCCTGTGTCACCCACCA
Downstream region at tRNA end position 
aatttttgta
Secondary structure (Cloverleaf model)
>W1511613969	Val	CAC
                   g      ACCA aatttttgta
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     T   T
                     C - G          T A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    T - A
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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