The detailed information of tRNA gene sequence


Sequence ID>W1511615523
Genome IDLCNA01000013
Search identical group
Phylum/ClassUnclassified
SpeciesParcubacteria group bacterium GW2011_GWB1_46_8 GW2011_GWB1_46_8 [LCNA]
Start position on genome 88
End posion on genome 1
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtaagaaagc
tRNA gene sequence 
GGTGAGGTGGCTGAGCGGTTTAAGGCGCTTGCTTGGAGAGCAAGTGTGTCCGAAAGGGCA
CCACGAGTTCAAATCTCGTCCTCACCGCnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>W1511615523	Ser	GGA
                   c      GCnn nnnnnnnnnn
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T G C T C     A
      C G A        G      | | | | |     A
    G       G T C G       A C G A G     C
    G         + | |                 T T
    T       A G G C
      T T A        G     TGTGTCCGAAAGGGCACC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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