The detailed information of tRNA gene sequence


Sequence ID>W1511617696
Genome IDLCPW01000002
Search identical group
Phylum/ClassUnclassified
Speciescandidate division CPR1 bacterium GW2011_GWC1_49_13 [LCPW]
Start position on genome 4134
End posion on genome 4211
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
aataaggtgc
tRNA gene sequence 
GGCGCCTTCGTCTAGCCTGGTCCAGGACATGACGTTCTCAACGTTAAAACACGGGTTCGA
ATCCCGTAGGCGCTACCA
Downstream region at tRNA end position 
atttttgaca
Secondary structure (Cloverleaf model)
>W1511617696	Glu	CTC
                   c      ACCA atttttgaca
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A          T A
                    T     T G C C C     A
    C C G A        C      | | | | |     G
  T         T C T G       A C G G G     C
  G         + | | |                 T T
  G         G G A C
    T C C A        A     AAAC
                    T - A
                    G + T
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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