The detailed information of tRNA gene sequence


Sequence ID>W1511617698
Genome IDLCPW01000003
Search identical group
Phylum/ClassUnclassified
Speciescandidate division CPR1 bacterium GW2011_GWC1_49_13 [LCPW]
Start position on genome 4113
End posion on genome 4201
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position
gggcgcacca
tRNA gene sequence
GGTGGGATGGCAGAGCGGACGATTGCGCGCGCCTTGAGAGCGCGAGTCCTTTTTAAGGAT
CGGAGGTTCGAATCCTCCTCCCACCGCCA
Downstream region at tRNA end position
taagtttggt
Secondary structure (Cloverleaf model)
>W1511617698	Ser	TGA
                   a      GCCA taagtttggt
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C C T C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G A G G     C
    G       + | | |                 T T
    A       T T G C
      C G A        G     AGTCCTTTTTAAGGATC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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