The detailed information of tRNA gene sequence


Sequence ID>W11160106
Genome IDAFEJ01000008
Search identical group
Phylum/ClassCyanobacteriota
SpeciesAcaryochloris sp. CCMEE 5410 [AFEJ]
Start position on genome 17801
End posion on genome 17713
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcaccaaccT
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCGGCAGACTCGAAATCTGTTTTAGGGTCAAACCTA
ACGGGGGTTCGAATCCCCCCCTCTCCGTtt
Downstream region at tRNA end position 
taattaagat
Secondary structure (Cloverleaf model)
>W11160106	Ser	CGA
                   T      GTtt taattaagat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TTTAGGGTCAAACCTAAC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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