The detailed information of tRNA gene sequence


Sequence ID>W11162702
Genome IDAFHE01000002
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfocurvibacter africanus str. Walvis Bay [AFHE]
Start position on genome 2995294
End posion on genome 2995387
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tttctcgaag
tRNA gene sequence 
GGAAGCATATCGTCACCGGTGTGGCGCCCGGACTTCAAATCCGGTGGACGGTCGAAAGGT
CGTCGGTAGGTTCGACTCCTATATGCTTCCGCCA
Downstream region at tRNA end position 
gtatgaaaga
Secondary structure (Cloverleaf model)
>W11162702	SeC(p)	TCA
                   g      GCCA gtatgaaaga
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T
                     T - A          T C
                    A     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          C     TGGACGGTCGAAAGGTCGTCG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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