The detailed information of tRNA gene sequence


Sequence ID>W11168169
Genome IDAFNU01000058
Search identical group
Phylum/ClassMycoplasmatota
SpeciesHaloplasma contractile SSD-17B [AFNU]
Start position on genome 4417
End posion on genome 4509
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caacagacac
tRNA gene sequence 
GGAGTAGTACTCAAGAGGCCGAAGAGGAGCCCCTGCTAAGGGCTTAGGTCGGATTAAACC
GGCGCGAGGGTTCAAATCCCTCCTACTCCGCCA
Downstream region at tRNA end position 
ttttaataaa
Secondary structure (Cloverleaf model)
>W11168169	Ser	GCT
                   c      GCCA ttttaataaa
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      C G A        G     TAGGTCGGATTAAACCGGCGC
                    A - T
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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