The detailed information of tRNA gene sequence


Sequence ID>C121005211
Genome IDCP003069
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae O1 str. 2010EL-1786 [CP003069, CP003070]
Start position on genome 2153578
End posion on genome 2153494
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
cagcctagat
tRNA gene sequence 
GCCGATGTGGTGAAATTGGTAGACACGACGGATTCAAAATCCGTTTCCTTCGGGAGTGAC
GGTTCAAGTCCGTCCATCGGTACCA
Downstream region at tRNA end position 
taatttaaag
Secondary structure (Cloverleaf model)
>C121005211	Leu	CAA
                   t      ACCA taatttaaag
                     G + T
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     C T G C C     A
      T A A        G      | | | | |     A
    T       A G T G       G A C G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TTCCTTCGGGAGT
                    A - T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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