The detailed information of tRNA gene sequence


Sequence ID>C121000434
Genome IDAP012051
Search identical group
Phylum/ClassCaldisericota
SpeciesCaldisericum exile AZM16c01 [AP012051]
Start position on genome 1072623
End posion on genome 1072547
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgctccaggt
tRNA gene sequence 
TGCGGGGTGGAGCAGTCAGGTAGCTCGTCGGGCTCATAACCCGGAGGTCGCTGGTTCAAA
TCCAGCCCCCGCGACCA
Downstream region at tRNA end position 
ttaatttatt
Secondary structure (Cloverleaf model)
>C121000434	Met	CAT
                   t      ACCA ttaatttatt
                     T + G
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G A C C     A
      T G A        G      | | | | |     A
    C       C G A G       G C T G G     C
    A       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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