The detailed information of tRNA gene sequence


Sequence ID>C121001332
Genome IDAP012342
Search identical group
Phylum/ClassNitrospirota
SpeciesLeptospirillum ferrooxidans C2-3 [AP012342]
Start position on genome 520826
End posion on genome 520736
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agaacgatca
tRNA gene sequence 
GGAGGGGTGGCAGAGTCCGGTTGATTGCTGCTGTCTCGAAAACAGTCGGCGTAAGAAACG
TCCGTGGGTTCGAATCCCACCCCCTCCGCCA
Downstream region at tRNA end position 
tcacaaaccg
Secondary structure (Cloverleaf model)
>C121001332	Ser	CGA
                   a      GCCA tcacaaaccg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G A C G       G T G G G     C
  G         + | | |                 T T
  G         T T G C
    T T G A        T     CGGCGTAAGAAACGTCC
                    G + T
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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