The detailed information of tRNA gene sequence


Sequence ID>C121001229
Genome IDAP012337
Search identical group
Phylum/ClassChloroflexota
SpeciesCaldilinea aerophila DSM 14535 = NBRC 104270 [AP012337]
Start position on genome 3130009
End posion on genome 3129920
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ctcaatacgt
tRNA gene sequence 
GGAGAGGTCGCATAGTCTGGCCGAGTGCGCGGGCCTGGAAAGCTCGTAGGGGTAACACCC
TCGAGGGTTCAAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gagaacagag
Secondary structure (Cloverleaf model)
>C121001229	Ser	GGA
                   t      GCCA gagaacagag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     A
  T         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    C C G A        G     TAGGGGTAACACCCTC
                    C - G
                    G - C
                    G + T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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