The detailed information of tRNA gene sequence


Sequence ID>C121012512
Genome IDCP003403
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesRahnella aquatilis HX2 [CP003403]
Start position on genome 1796450
End posion on genome 1796361
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
taacgaacac
tRNA gene sequence 
GGTGAGGTGTCTGAGTGGCTGAAGGAGCACGCCTGGAAAGTGTGTATATGAGCAATCGTA
TCGAGGGTTCGAACCCCTCTCTCTCCACCA
Downstream region at tRNA end position 
cattaaacaa
Secondary structure (Cloverleaf model)
>C121012512	Ser	GGA
                   c      ACCA cattaaacaa
                     G - C
                     G - C
                     T   T
                     G - C
                     A - T
                     G - C
                     G + T          C A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G A G G G     C
    G         + | |                 T T
    C       A G G A
      T G A        G     TATATGAGCAATCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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