The detailed information of tRNA gene sequence


Sequence ID>C121012148
Genome IDCP003390
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesMethylophaga nitratireducenticrescens JAM1 [CP003390]
Start position on genome 274872
End posion on genome 274796
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atcaggtcgc
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAATGCTGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
tttttatggt
Secondary structure (Cloverleaf model)
>C121012148	Asp	GTC
                   c      GCCA tttttatggt
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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