The detailed information of tRNA gene sequence


Sequence ID>C121006091
Genome IDCP003115
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema pallidum subsp. pallidum DAL-1 [CP003115]
Start position on genome 157744
End posion on genome 157819
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
acaatacgca
tRNA gene sequence 
GGGCGCTTAGCTCAGCGGGCAGAGCGCTTGGTTTACACCCAAGAGGTCAGCGGTTCAAAC
CCGTTAGCGCCCAACA
Downstream region at tRNA end position 
tgcagccgcg
Secondary structure (Cloverleaf model)
>C121006091	Val	TAC
                   a      AACA tgcagccgcg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A          C A
                    T     T T G C C     A
      C G A        A      | + | | |     A
    G       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    G - C
                  T       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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