The detailed information of tRNA gene sequence


Sequence ID>C161000123
Genome IDAP013042
Search identical group
Phylum/ClassGammaproteobacteria
Speciesendosymbiont of Bathymodiolus septemdierum str. Myojin knoll Myojin Knoll [AP013042]
Start position on genome 482990
End posion on genome 483066
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accaaaaaat
tRNA gene sequence 
GGAGCGGTAGCTCAGTTGGTTAGAGTGCCTGCCTGTCACGCAGGACGTCGCGGGTTCGAA
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
tttttgaacc
Secondary structure (Cloverleaf model)
>C161000123	Asp	GTC
                   t      GCCA tttttgaacc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     ACGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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