The detailed information of tRNA gene sequence


Sequence ID>C161033330
Genome IDCP011271
Search identical group
Phylum/ClassPlanctomycetota
SpeciesGemmata sp. SH-PL17 [CP011271]
Start position on genome 7165005
End posion on genome 7165077
Amino Acid Pseudo
Anticodon TGG
Upstream region at tRNA start position 
ctgtcggttt
tRNA gene sequence 
CAGGACGTGGGCCATTGGTTGGCCGCGAGTCTTGGGAACTCGTTCAAGTAGGTTCGATTC
CTGCCGTCCTGACtg
Downstream region at tRNA end position 
cgcaccgtcc
Secondary structure (Cloverleaf model)
>C161033330	Pseudo	TGG
                   t      ACtg cgcaccgtcc
                     C - G
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          T T
                    T     C G T C C     A
        T A        G      | + | | |     G
      T     C C G G       G T A G G     C
      G     | | | |                 T T
      G     G G C C
        T T        G     TTCAA
                    C - G
                    G - C
                    A - T
                    G - C
                    T - A
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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