The detailed information of tRNA gene sequence


Sequence ID>C161041897
Genome IDCP012401
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesAzospirillum thiophilum BV-S [CP012401, CP012402, CP012403, CP012404, CP012405, CP012406, CP012407, CP012408]
Start position on genome 2102241
End posion on genome 2102316
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcccgcggtt
tRNA gene sequence 
GGGCCTGTAGTTCAGCGGTTAGAACGCGCCGCTCATAACGGTGTTGTCGTCGGTTCGAAT
CCGGCCGGGCCCACCA
Downstream region at tRNA end position 
ttttttcccg
Secondary structure (Cloverleaf model)
>C161041897	Met	CAT
                   t      ACCA ttttttcccg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C G G C C     A
      C G A        A      | + | | |     G
    G       C T T G       G T C G G     C
    G       | | | |                 T T
    T       G A A C
      T A          G     TTGTC
                    C - G
                    G + T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.-

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