The detailed information of tRNA gene sequence


Sequence ID>C161050436
Genome IDCP013062
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Peribacter riflensis [CP013062]
Start position on genome 547951
End posion on genome 548042
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttgccggcgt
tRNA gene sequence 
GGAGAGGTGGCTGAGCGGCCGAAAGCACCACACTGCTAATGTGGTATACGGGTAAAACCG
TATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
cgtcgttcgc
Secondary structure (Cloverleaf model)
>C161050436	Ser	GCT
                   t      GCCA cgtcgttcgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       G A G G G     C
    G         | | |                 T T
    C       A A G C
      C G A        A     TATACGGGTAAAACCGTATC
                    C - G
                    C - G
                    A - T
                    C - G
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.-

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