The detailed information of tRNA gene sequence


Sequence ID>C161094275
Genome IDCP016172
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesBordetella flabilis AU10664 [CP016172]
Start position on genome 4332998
End posion on genome 4332906
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caaattctgc
tRNA gene sequence 
GGAGACGTGCCCGAGAGGCTGAAGGGGCTCCCCTGCTAAGGGAGTATGTGGCTAAAAACT
GCATCGTGGGTTCGAATCCCACCGTCTCCGCCA
Downstream region at tRNA end position 
cagagtcacc
Secondary structure (Cloverleaf model)
>C161094275	Ser	GCT
                   c      GCCA cagagtcacc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C A C C C     A
      A G A        G      | | | | |     G
    G       G C C C       G T G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TATGTGGCTAAAAACTGCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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