The detailed information of tRNA gene sequence


Sequence ID>C161107273
Genome IDLN885086
Search identical group
Phylum/ClassNitrospirota
SpeciesCandidatus Nitrospira inopinata [LN885086]
Start position on genome 1658315
End posion on genome 1658389
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcgtccgggg
tRNA gene sequence 
AGGGGCATGGTGTCAATGGCAGCACATCGGTCTCCAAAACCGAGAGTCTAGGTTCAAATC
CTAGTGCCCCTGCCA
Downstream region at tRNA end position 
aacgttcgcg
Secondary structure (Cloverleaf model)
>C161107273	Trp	CCA
                   g      GCCA aacgttcgcg
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G A T C C     A
      A A C        G      | | | | |     A
    T       T G T G       C T A G G     C
    G       + | | |                 T T
    G       G C A C
      C A          A     GAGT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[Ensembl]

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