The detailed information of tRNA gene sequence


Sequence ID>W121008697
Genome IDAGCQ01000003
Search identical group
Phylum/ClassCalditrichota
SpeciesCaldithrix abyssi DSM 13497 [AGCQ]
Start position on genome 1876667
End posion on genome 1876594
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ttcattgaat
tRNA gene sequence 
GGCGCGTTCGTCTAGGGGTCTAGGACGCCGGCCTCTCACGTCGGTAACACGGGTTCGAAT
CCCGTACGCGCTACtt
Downstream region at tRNA end position 
tgagccggtt
Secondary structure (Cloverleaf model)
>W121008697	Glu	CTC
                   t      ACtt tgagccggtt
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        G     TAAC
                    C - G
                    C - G
                    G - C
                    G + T
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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